Pharma
Resources tagged Pharma#
Accelerating Study Insights with Shiny and Posit | Regeneron x Atorus
In this session, Atorus and Regeneron, and Posit showcase their innovative partnership.
Topics covered: -Building a Unified Analytical Environment: Learn how to reduce friction by integrating fragmented SAS and R workflows. -Case Study: A Config-Driven App: See a live demo of how a simple configuration file can build a fully functional application for data review and safety monitoring. -Operational Shifts: Understand how internal teams are empowered to independently manage and extend their own applications in a regulated environment.
This isn’t just about technology—it’s about the strategic shift required to simplify development and accelerate insights within a regulated environment.
Learn more about Posit’s work in the pharma space: https://posit.co/use-cases/pharma/?utm_source=youtube&utm_medium=social&utm_term=pharma&utm_content=atorus-regeneron
Pharma Open-Source Packages and the R Validation Hub | A conversation with Aaron Clark
Posit’s Director of Life Sciences, Phil Bowsher, sat down with Aaron Clark, Senior Principal Clinical Scientist at Arcus Biosciences, to discuss various topics within the open-source clinical reporting space including Aaron’s career in pharma, the R Validation Hub, the open-source package riskmetric, and more.
More about Posit’s work in the pharma space: https://posit.co/use-cases/pharma/
Open Source in Clinical Reporting | A Conversation with Ben Arancibia at GSK
Posit’s Director of Life Sciences, Phil Bowsher, sat down with GSK’s Director of Data Science, Ben Arancibia, to discuss various topics within the open-source clinical reporting space.
More about Posit’s work in the pharma space: https://posit.co/use-cases/pharma/
Watch GSK’s latest web event with Posit: https://www.youtube.com/watch?v=xDrt6txplek
Sean Lopp | Posit Investments in Pharma | Posit
From rstudio::global(2021) Pharma X-Sessions, sponsored by ProCogia: R/Pharma is an organization of R enthusiasts who work in the pharma and biotech industries. This presentation summarizes the group and presents some goals for 2021.
More about Sean Lopp: Sean has a degree in mathematics and statistics and worked as an analyst at the National Renewable Energy Lab before making the switch to customer success at RStudio. In his spare time he skis and mountain bikes and is a proud Colorado native.
Learn more about the rstudio::global(2021) X-Sessions: https://blog.rstudio.com/2021/01/11/x-sessions-at-rstudio-global/
Marly Gotti | Risk Assessment Tools: R Validation Hub Initiatives | Posit
From rstudio::global(2021) Pharma X-Sessions, sponsored by ProCogia: we will present some of the resources and tools the R Validation Hub has been working on to aid the biopharmaceutical industry in the process of using R in a regulatory setting. In the talk, you will learn about the {riskmetric} R package, which measures the risk of using R packages, and you will also see a demo of the Risk Assessment Shiny application, which is an advanced user interface for {riskmetric}.
About Marly Gotti: Marly Gotti is a Senior Data Scientist at Biogen and a former RStudio intern. She is also an executive committee member of the R Validation Hub, where she advocates for the use of R within a biopharmaceutical regulatory setting.
Learn more about the rstudio::global(2021) X-Sessions: https://blog.rstudio.com/2021/01/11/x-sessions-at-rstudio-global/
Harvey Lieberman | R/Pharma | Posit
From rstudio::global(2021) Pharma X-Sessions, sponsored by ProCogia: R/Pharma is an organization of R enthusiasts who work in the pharma and biotech industries. This presentation summarizes the group and presents some goals for 2021.
About Harvey Lieberman: Harvey Lieberman works at Novartis and has been a member of R/Pharma since 2017.
For more on R/Pharma: https://www.pharmar.org/
Learn more about the rstudio::global(2021) X-Sessions: https://blog.rstudio.com/2021/01/11/x-sessions-at-rstudio-global/
Mike Garcia | R in Pharma: Intro to Shiny | Posit
Slides: https://garciamikep.github.io/rstudioglobal-2021-shiny-slides/slides.html#1
From rstudio::global(2021) Pharma X-Sessions, sponsored by ProCogia: in this introduction to Shiny app development, we begin with a quick review of visualization with {ggplot2} and then cover core concepts in app structure and reactive programming. After building several Shiny apps of increasing complexity, we wrap up with a demonstration of how to include your Shiny app in a dashboard using the {flexdashboard} package.
About Mike Garcia: Mike is a Data Science Consultant with ProCogia, with a background in Biostatistics and experience in clinical trial design and public health research. If not geeking out on data with a cup of coffee and spreading his passion for R, he’s probably out enjoying the outdoors.
Learn more about the rstudio::global(2021) X-Sessions: https://blog.rstudio.com/2021/01/11/x-sessions-at-rstudio-global/
To hear more about how other major pharmaceutical companies are transitioning to open source data science you can watch talks from this year’s R in Pharma conference: https://www.youtube.com/@RinPharma/playlists
At Posit, we have a dedicated Pharma team to help organizations migrate and utilize open source for drug development. To learn more about our support for life sciences, please see our dedicated Pharma page where you can book a call with our team. (https://posit.co/solutions/pharma )
Volha Tryputsen | R in Janssen Drug Discovery Statistics | Posit
From rstudio::global(2021) Pharma X-Sessions, sponsored by ProCogia: this talk discusses how R is utilized in the Janssen drug discovery statistics workflow.
About Volha: Volha is the Principal Statistician in the Translational Medicine and Early Development Statistics (TMEDS) group in the Quantitative Sciences Department of Janssen R&D.
Learn more about the rstudio::global(2021) X-Sessions: https://blog.rstudio.com/2021/01/11/x-sessions-at-rstudio-global/
Roche & Novartis: Effective Visualizations for Data Driven Decisions || Posit (2020)
Effective visual communication is a core task for all data scientists including statisticians, epidemiologists, machine learning experts, bioinformaticians, etc.
By using the right graphical principles, we can better understand data, highlight core insights and influence decisions toward appropriate actions. Without it, we can fool ourselves and others and pave the way to wrong conclusions and actions. While numerous solutions exist to analyze data, these often require many manual steps to convert them into visually convincing and meaningful reports. How do we put this in practice in an accurate, transparent and reproducible way?
In this webinar we will introduce an open collaborative effort, currently undertaken by Roche and Novartis, to develop solutions for effective visual communication with a focus on reporting medical and clinical data. The aim of the collaboration is to develop a user-friendly, fit for purpose, open source package to simplify the use of good graphical principles for effective visual communication of typical analyses of interventional and observational data encountered in clinical drug development. We will introduce the initial visR package design which easily integrates into a typical tidyverse workflow. The package provides guidance and meaningful default parameters covering all aspects from the design, implementation and review of statistical graphics.
Webinar materials: https://posit.co/resources/videos/effective-visualizations-for-data-driven-decisions/
About Charlotta: Charlotta is a computational biologist by training and works as a data scientist in the Personalized Healthcare department at Roche where she uses R to untap the wealth of information coming from healthcare data collected in real-world settings to support the development of new medicines.
About Diego: Diego is a data scientist specializing in applied machine learning at Roche Personalized Healthcare since March 2019. He has developed models to perform various tasks and analyze diverse data sources. Currently, his main applications of interest are in onocology and clinico-genomics.
About Mark: Mark is a methodologist supporting the clinical development and analytics department at Novartis. He has a focus on data visualization working on a number of internal and external initiatives to improve the reporting of clinical trials and observational studies.
About Marc: Marc is a biostatistics group head at Novartis. He is interested in advancing the methods and practice of clinical development, for instance through effective use of graphics. https://graphicsprinciples.github.io/